王晓光, 雷永良, 柳付明, 朱武洋, 陶晓燕. 浙江省野生动物鼬獾和家犬狂犬病病毒L基因序列测定分析[J]. 疾病监测, 2020, 35(2): 104-109. DOI: 10.3784/j.issn.1003-9961.2020.02.005
引用本文: 王晓光, 雷永良, 柳付明, 朱武洋, 陶晓燕. 浙江省野生动物鼬獾和家犬狂犬病病毒L基因序列测定分析[J]. 疾病监测, 2020, 35(2): 104-109. DOI: 10.3784/j.issn.1003-9961.2020.02.005
Xiaoguang Wang, Yongliang Lei, Fuming Liu, Wuyang Zhu, Xiaoyan Tao. Sequence analysis on L gene of rabies virus isolated from wild Melogale moschata and domestic dogs in Zhejiang[J]. Disease Surveillance, 2020, 35(2): 104-109. DOI: 10.3784/j.issn.1003-9961.2020.02.005
Citation: Xiaoguang Wang, Yongliang Lei, Fuming Liu, Wuyang Zhu, Xiaoyan Tao. Sequence analysis on L gene of rabies virus isolated from wild Melogale moschata and domestic dogs in Zhejiang[J]. Disease Surveillance, 2020, 35(2): 104-109. DOI: 10.3784/j.issn.1003-9961.2020.02.005

浙江省野生动物鼬獾和家犬狂犬病病毒L基因序列测定分析

Sequence analysis on L gene of rabies virus isolated from wild Melogale moschata and domestic dogs in Zhejiang

  • 摘要:
    目的测定浙江省野生动物鼬獾和家犬狂犬病病毒L基因序列,在分子水平分析转录酶大蛋白(LP)的变异特点和遗传进化特征。
    方法对实验室检测阳性的狂犬病病毒标本进行L基因编码区核酸序列测定,通过生物分析软件比较L基因核苷酸序列和氨基酸序列,并与GenBank的36个参考序列编码区进行比对分析。
    结果测序获得野生动物鼬獾(F02、F04)和家犬(D01、D02)二种宿主来源的狂犬病病毒街毒株L基因核苷酸全长序列并递交GenBank,开放读码框(ORF)均为6 387 bp,编码区均以2个连续的起始密码子ATG起始,编码2 128个氨基酸。 在LP保守结构域上的特异功能短序列几乎完全保守,各结构域之间的序列保守性略差,对存在的变异位点绝大多数极性并没有变化,系统进化分析显示浙江省鼬獾、犬街毒株均归属于传统的狂犬病病毒 Asian谱系,与我国广泛传播的狂犬病病毒同属一种系。
    结论浙江省狂犬病病毒L基因的构成与传统狂犬病病毒一致,所构建进化树的分析作用与N基因相同,鼬獾病毒依然具有本土狂犬病病毒的基因特点,家犬病毒可能与我国多种宿主动物病毒来源相同或者具有新近的相互传播,不同宿主动物狂犬病病毒具有种群多样性的进化特点和地域性流行特征。

     

    Abstract:
    ObjectiveTo understand the L gene sequences of rabies virus isolated from wild Melogale moschata and domestic dogs and the mutation and genetic evolution characteristics of LP at the molecular level in Zhejiang.
    MethodsThe nucleic acid sequence of the L gene coding region was determined by using laboratory-positive rabies virus samples, and the sequences of nucleotide acid and amino acid of L gene were analyzed with software bioanalysis, and the encoded protein were aligned with 36 reference sequence encoding regions from GenBank.
    ResultsThe full-length nucleotide acid sequences of the L gene of rabies virus strains isolated from wild Melogale moschata (F02, F04) and domestic dogs (D01, D02) were obtained by sequencing and submitted to GenBank. The ORFs were all 6 387 bp, and all the encoding regions started with two consecutive codons ATG, encoding 2 128 amino acids. The short sequences of specific functions on the conserved domain of LP were almost completely conserved, and the sequence conservation between each domain was slightly poor. The polarity of most mutations did not change, and most of them were nonsense mutations. Phylogenetic analysis showed that the wild rabies strains isolated from Melogale moschata and domestic dogs in Zhejiang belong to the traditional rabies virus Asian lineage and belong to the same phylogenetic group of the widely spread rabies virus in China.
    ConclusionThe composition of the rabies virus L gene in Zhejiang is consistent with other traditional rabies viruses. The constructed phylogenetic tree has the same analytical effect as the N gene. The rabies virus from Melogale moschata still has the genetic characteristics of the native rabies virus. Domestic dog rabies virus might has same origin with rabies viruses in other host animals in China and might has cross transmission recently. Rabies viruses from different hosts have the evolution characteristics of population diversity and area specific spread characteristics.

     

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