陈敏玫, 周开姣, 居昱, 谭毅. 2012年广西首次检出诺如病毒GⅡ.4 Sydney变异株[J]. 疾病监测, 2014, 29(1): 28-31. DOI: 10.3784/j.issn.1003-9961.2014.01.008
引用本文: 陈敏玫, 周开姣, 居昱, 谭毅. 2012年广西首次检出诺如病毒GⅡ.4 Sydney变异株[J]. 疾病监测, 2014, 29(1): 28-31. DOI: 10.3784/j.issn.1003-9961.2014.01.008
CHEN Min-mei, ZHOU Kai-jiao, JU Yu, TANG Yi. The first detection of Norovirus GⅡ.4 Sydney variant in Guangxi, 2012[J]. Disease Surveillance, 2014, 29(1): 28-31. DOI: 10.3784/j.issn.1003-9961.2014.01.008
Citation: CHEN Min-mei, ZHOU Kai-jiao, JU Yu, TANG Yi. The first detection of Norovirus GⅡ.4 Sydney variant in Guangxi, 2012[J]. Disease Surveillance, 2014, 29(1): 28-31. DOI: 10.3784/j.issn.1003-9961.2014.01.008

2012年广西首次检出诺如病毒GⅡ.4 Sydney变异株

The first detection of Norovirus GⅡ.4 Sydney variant in Guangxi, 2012

  • 摘要: 目的 了解2012年广西壮族自治区(广西)罗城县诺如病毒流行株基因型谱分布。方法 2012年收集323例5岁以下腹泻患儿粪便标本,反转录-聚合酶链反应(reverse transcription-polymerase chain reaction,RT-PCR)检测诺如病毒,对VP1区部分核苷酸序列进行测定并构建核苷酸系统进化树。结果 检测323例病例粪便标本,诺如病毒阳性24份(7.43%);诺如病毒GⅠ基因组2份(8.33%),GⅠ.4和GⅠ.6各1份;GⅡ基因组22份(91.67%),GⅡ.6基因型1份(1/22),GⅡ.4基因型21份(21/22)。GⅡ.4中,18份(85.71%)属于2006b变异株簇,3份(14.29%)属于Sydney变异株簇。结论 2012年广西罗城县诺如病毒流行株基因型呈现多样性,以GⅡ.42006b变异株为优势流行株,首次检出GⅡ.4 Sydney变异株。

     

    Abstract: Objective To understand the genotypes of circulating Norovirus strains in Guangxi in 2012. Methods A total of 323 fecal samples collected from diarrheal children under 5 years old in 2012 were detected for Norovirus with RT-PCR, and corresponding sequences of partial VP1 region were analyzed and phylogenetic tree was constructed. Results Among the samples detected, twenty-four were Norovirus positive. Based on partial sequences of VP1 region, two strains belonged to genotype Ⅰ, twenty-two belonged to genotype Ⅱ. Three of 22 GⅡ strains collected in November and December belonged to GⅡ.4 Sydney 2012 cluster,eighteen strains belonged to the 2006b cluster and one belonged to the GⅡ.6 cluster. Conclusion The circulating Norovirus genotypes were with diversity, and Norovirus GⅡ.4 Sydney variant was first detected in Guangxi.

     

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