2021-2024年浙江省杭州市余杭区学校急性胃肠炎事件中NoV的分子流行特征

The molecular epidemiological characteristics of norovirus in acute gastroenteritis outbreaks at schools of Yuhang district in Hangzhou, Zhejiang, 2021−2024

  • 摘要:
    目的 了解浙江省杭州市余杭区2021-2024年急性胃肠炎事件中NoV(NoV)的分子流行特征。
    方法 收集该区2021-2024年学校急性胃肠炎事件中NoV感染病例样本,用反转录聚合酶链式反应对NoV进行分型,对阳性样本应用一代或二代测序进行基因组扩增和序列分析。
    结果 2021-2024年共收集学校急性胃肠炎感染事件70起共593份标本;通过real-time PCR 方法检测,结果有379份为NoV阳性,成功对其中276份样本进行分型。其中GⅠ型NoV涉及12起疫情,GⅡ型涉及57起,1起为GⅠ/GⅡ型混合感染。 基因型分析共检出15个基因型,具有丰富的基因多样性。 其中GⅡ.17P17、GⅡ.3P12、GⅡ.7P7 为主要基因型。 同源性分析结果显示不同事件的同一基因型的样本之间同源性为89.20%~100.00%,同一事件中同一基因型样本间,同源性为99.40~100.00%。
    结论 杭州市余杭区2021-2024年学校急性胃肠炎事件中的NoV存在遗传多样性,连续流行株监测显示不同年份有流行型别的转换,可持续开展NoV分子特征监测,为诺如疫情暴发预警提供科学依据。

     

    Abstract:
    Objective  To investigate the molecular epidemiological characteristics of norovirus in acute gastroenteritis outbreaks at schools in Yuhang district of Hangzhou from 2021 to 2024.
    Methods  Samples of norovirus in acute gastroenteritis outbreaks at schools from 2021 to 2024 were collected, and norovirus was genotyped by reverse transcription polymerase chain reaction. The positive samples were subjected to first- or second- generation sequencing for genomic amplification and sequence analysis .
    Results  From 2021 to 2024, a total of 593 specimens from 70 acute gastroenteritis infection events in schools were collected. Among them, 379 norovirus samples were detected as positive and the viral genotypes of 276 specimens were successfully measured. Norovirus type GⅠ was involved in 12 outbreaks, and type GⅡ was involved in 57 outbreaks (including one of mixed infection of type GⅠ/ type GⅡ), with a total of 15 genotypes discovered. Genotypes GⅡ.17P17, GⅡ.3P12, and GⅡ.7P7 are the main epidemic strains. The homology among samples of the same genotype for different events ranged from 89.20% to 100.00% , the homology among samples of the same genotype in the same event ranged from 99.40% to 100.0%.
    Conclusion Noroviruses circulating in school acute gastroenteritis outbreaks in Yuhang district of Hangzhou from 2021 to 2024 exhibited significant genetic diversity, and continuous surveillance revealed a shift in predominant genotypes over different years. Ongoing molecular surveillance of norovirus is essential to provide a scientific basis for early warning of potential outbreaks.

     

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