2023年海南省登革热分子流行病学特征分析

Molecular Epidemiological Analysis of of Dengue Fever in Hainan Province in 2023

  • 摘要:
    目的 研究2023年海南省登革热(DF)分子流行病学特征和登革病毒(DENV)遗传多样性,为登革热疫情溯源分析和预警预测积累实验证据。
    方法 通过中国疾病预防控制信息系统(NNDRS)收集海南省2023年登革热病例信息,采集病例血清样本,采用实时荧光定量RT-PCR法进行核酸检测,核酸检测阳性样本进行病毒分离,扩增病毒包膜(E)蛋白编码基因,测定核苷酸序列,与2019-2023年间全球主要流行区各年份的代表株序列进行比较分析。
    结果 2023年海南省累计报告病例363例,7月份报告首例病例,9-10月份达发病高峰,12月份疫情终止,具有明显时空聚集性特征;其中乐东县报告病例最多,DENV-2感染占绝对优势(99.58%, 238/239),三亚市38例病例中DENV-1(20/38)和DENV-2(18/38)同时流行,其他地区呈低水平散发状态,主要由DENV-1感染引发;遗传进化分析显示, DENV-1型均属于基因型Ⅰ型,E基因序列间核苷酸同源性为98.79%~100%; DENV-2基因型均属于都市型(Cosmopolitan),E基因序列间核苷酸同源性为98.99%~100%,与近年来老挝等东南亚地区流行毒株和国内广东省发表病毒基因序列同源性高,提示海南省登革热疫情可能由东南亚或广东省输入引发。
    结论 2023年海南省局部地区暴发疫情由DENV-1和DENV-2感染引发,病毒与东南亚和广东省近年报道病毒基因组序列高度同源。

     

    Abstract: Objective: To study the molecular epidemiological characteristics of dengue fever and the genetic diversity of dengue virus (DENV) in Hainan Province in 2023, in order to accumulate experimental evidence for the traceability analysis and early warning prediction of dengue fever. Method: The information on dengue fever cases in Hainan Province in 2023 was collected through the China National System for Disease Control and Prevention (NNDRS). Blood samples were collected from the cases, and real-time fluorescence quantitative RT-PCR was used for nucleic acid testing. Positive samples were used to isolate the virus, and the envelope (E) protein encoding gene was amplified. The nucleotide sequence was determined and compared with representative strain sequences from major global epidemic areas from 2019 to 2023. Result: A total of 363 cases were reported in Hainan Province in 2023, with the first case reported in July. The peak of incidence was reached in September and October, and the epidemic ended in December, showing obvious spatiotemporal clustering characteristics. Ledong County reported the most cases, mainly dominated by DENV-2 infection (99.58%, 238/239). Among the 38 cases in Sanya City, DENV-1 (20/38) and DENV-2 (18/38) were both prevalent, while other areas showed a low-level sporadic state, mainly caused by DENV-1 infection. Genetic evolution analysis showed that DENV-1 belonged to genotype I, and the nucleotide homology between E gene sequences was 98.79%~100%; The DENV-2 belongs to the Cosmopolitan type, and the nucleotide homology between the E gene sequences is 98.99%~100%. It has high homology with the virus gene sequences of the prevalent strains in Southeast Asia such as Laos and those published in Guangdong Province in China in recent years, indicating that the outbreaks of dengue in Hainan Province may have been caused by the introduction of the disease from Southeast Asia or Guangdong Province. Conclusion: In 2023, localized outbreaks of Dengue in Hainan Province were caused by DENV-1 and DENV-2, with the viruses showing high genetic homology to previously reported viral genomes in Southeast Asia and Guangdong Province.

     

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