基于污水流行病学与症候群监测的2023年广东省广州市诺如病毒流行特征分析

Analysis on epidemiological characteristics of norovirus infection in Guangzhou of Guangdong based on epidemiology surveillance for sewage and syndrome, 2023

  • 摘要:
    目的  整合临床症候群监测与污水流行病学监测数据,分析2023年广东省广州市诺如病毒的流行特征、基因型分布及其在人群与环境中的传播动态,为疫情防控提供科学依据。
    方法  收集2023年广州市哨点医院腹泻病例标本(粪便或肛拭子)1192份(症候群监测部分),以及全市19家污水处理厂的污水样本1157份(污水流行病学监测部分)。采用实时荧光PCR检测诺如病毒核酸,对阳性样本进行逆转录PCR扩增和二代测序,完成基因分型与系统进化分析。
    结果  腹泻病例中诺如病毒阳性检出率为13.34%(159/1192),其中GⅡ群的检出率是12.25%,GⅠ群的检出率是2.01%。GⅡ.4P16为绝对优势型,尤其在8–12月占主导;年初流行高峰由GⅡ.17P17、GⅡ.6P7等多基因型共同引起。GⅠ群中以GⅠ.3P13为主。污水样本中诺如病毒总阳性率高达85.48%(989/1157),GⅠ与GⅡ群检出率分别为83.23%和79.68%,尤其在3月二者同时达高峰。系统进化分析显示本地流行型别与国内及全球流行型别遗传关联密切。
    结论  2023年广州市诺如病毒流行呈现“临床-环境”协同传播特征,GⅡ.4P16是主要致病型,流行高峰集中在冬春季和秋季。污水监测能有效反映社区诺如病毒流行趋势,并提供早期预警。建议在综合监测框架下,进一步整合临床症候群、环境监测与分子分型数据,以提升诺如病毒防控能力。

     

    Abstract:
    Objective To analyze the epidemiological and etiological characteristics and transmission dynamics of norovirus infection in Guangzhou, Guangdong province in 2023, and provide evidence for the prevention and control of norovirus infection.
    Methods A total of 1 192 stool samples or anal swabs were collected from diarrhea cases in syndrome surveillance at sentinel hospitals in Guangzhou in 2023, and 1 157 sewage samples were collected in sewage surveillance from 19 wastewater treatment plants in Guangzhou. Real-time fluorescent PCR was used for the detection of norovirus nucleic acid. Reverse transcription PCR amplification and next-generation sequencing were performed for the positive samples, then genotyping and phylogenetic analysis were conducted.
    Results The positive detection rate of norovirus in diarrhea cases was 13.34% (159/1 192), with the detection rate of genotype GⅡ being 12.25% and genotype GⅠ being 2.01%. GⅡ.4P16 was the most predominant genotype, especially during August - December. The norovirus infection epidemic occurred in early 2023 was caused by multiple genotypes including GⅡ.17P17 and GⅡ.6P7. GⅠ.3P13 was most common in genotype GⅠ. The overall positive rate of norovirus in sewage samples was as high as 85.48% (989/1 157), with the detection rates of genotypes GⅠ and GⅡ reaching 83.23% and 79.68%, respectively. The incidences of the infections caused by both genotypes peaked simultaneously in March. Phylogenetic analysis showed that the genotypes detected in Guangzhou had a close genetic correlation with those detected both at home and abroad.
    Conclusion The norovirus infection epidemic in Guangzhou in 2023 showed the characteristic of "co-transmission of case and environment". Norovirus GⅡ.4P16 was the main pathogen, and the infections mainly occurred in winter, spring and autumn. Sewage surveillance can effectively reflect the incidence trend of norovirus infection in communities and provide early warnings. It is suggested to integrate the data from clinical syndrome surveillance, environmental surveillance and molecular typing to improve the prevention and control of norovirus infection.

     

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