健康从业人群携带编码替加环素耐药基因tet(X4)的IncX1型质粒及宿主菌的特征分析

Characteristics of IncX1 Plasmids encoding tigecycline resistance gene tet(X4) and their bacterial hosts in healthy service workers

  • 摘要:
    目的 本研究旨在探究健康从业人群携带替加环素tet(X4)基因的IncX1质粒的基因组特征及IncX1质粒的全球分布规律。
    方法  在中国北方山东省及南方广西壮族自治区开展健康从业人员的粪便样本系统性采集,通过替加环素抗性平板与荧光聚合酶链式反应技术,筛选携带含有tet(X4)基因的IncX1型质粒的菌株。使用微量肉汤法对菌株进行药物敏感性试验,通过二代加三代测序以获取菌株及其质粒的全基因组完成图序列。基于病原菌质粒数据库(PIPdb)数据分析全球IncX1型质粒的分布规律。通过比较基因组学、系统发育分析及遗传结构比对,揭示IncX1型质粒与公共数据库中质粒之间的进化关联和遗传特征。通过接合转移实验确定质粒转移效率。
    结果  基于基因组完成图序列分析鉴定出2个携带tet(X4)的IncX1型质粒,2个质粒的核心tet(X4)基因遗传环境均为IS26-rdmC-tet(X4)-ISCR2,质粒可稳定携带tet(A)floRlinGANT(3'')-IIa耐药基因。接合转移实验显示该质粒可转移、可介导替加环素类抗生素耐药性的传递。
    结论  在健康从业人群中检测到携带tet(X4)的IncX1质粒,提示该人群具有社区内潜在传播的风险。建议将健康从业人群纳入常态化耐药性监测体系,建立基于质粒基因组完成图的耐药质粒监管体系。

     

    Abstract:
    Objective To understand the genomic characteristics of IncX1 plasmids carrying tigecycline resistance gene tet(X4) isolated from healthy service workers and the global distribution of IncX1 plasmids.
    Methods  Systematic stool sample collection was conducted in healthy service workers in Shandong province and Guangxi Zhuang autonomous region. The strains carrying the tet(X4) gene and IncX1 plasmids were screened by using tigecycline-containing plates and fluorescent polymerase chain reaction. Antimicrobial susceptibility testing was performed by using broth microdilution method. Whole-genome sequences of the strains and their plasmids were obtained by the combination of second and third generation sequencing. The global distribution of IncX1 plasmids was analyzed using the plasmids in pathogens database (PIPdb). Comparative genomics, phylogenetic analysis, and genetic structure alignment were used to reveal the evolutionary relationships and genetic features between the plasmids identified in this study and those in public databases. Conjugation experiments were conducted to determine plasmid transfer efficiency.
    Results Based on complete genome sequence analysis, two IncX1 plasmids carrying tet(X4) gene were identified. The core genetic context of tet(X4) in both plasmids was IS26-rdmC-tet(X4)-ISCR2, which can carry resistance genes tet(A), floR, linG and ANT(3'')-IIa stably. Conjugation experiments confirmed that the plasmids were transferable and could mediate tigecycline resistance.
    Conclusion  IncX1 plasmids carrying tet(X4) gene were detected in healthy service workers, suggesting the potential risk for community transmission. It is suggested to include healthy service workers in routine antimicrobial resistance surveillance and establish a resistance plasmid monitoring system based on complete plasmid genome sequences.

     

/

返回文章
返回