2024年江苏省常熟地区急性呼吸道感染病例人腺病毒感染情况及基因特征分析

Analysis on infection status and genetic characteristics of human adenovirus in acute respiratory infection cases in Changshu, Jiangsu province, 2024

  • 摘要:
    目的 分析2024江苏省常熟地区急性呼吸道感染(ARI)病例中人腺病毒(HAdV)感染情况和基因特征。
    方法 收集2024年1—12月江苏省常熟市门诊与住院ARI患者的鼻咽拭子标本共1 718份,采用实时荧光定量聚合酶链式反应(RT-qPCR)检测17种常见呼吸道病原体。对HAdV阳性样本,使用普通 PCR 扩增HAdV的Hexon基因Loop2高变区进行初步型别鉴定。在此基础上进一步扩增 Penton Base 基因及 Fiber 基因,分析HAdV的基因型别及序列特征。
    结果 1 718例ARI病例中共检出病原体阳性660例,总检出率为38.42%。其中HAdV阳性119例,占全部ARI病例的6.93%(119/1 718),占所有病原体阳性病例的18.03%(119/660)。HAdV单一感染71例(59.66%),混合感染48例(40.34%)。不同年龄组HAdV检出率差异具有统计学意义(χ2=25.029,P<0.001),其中5~18岁年龄组最高(11.73%)。HAdV感染病例在8—9月份明显增加,其中9月份达到全年峰值(22.50%)。共获得49株HAdV基因序列,其中HAdV-B3型为主要流行型别。
    结论 HAdV是引起2024年江苏省常熟市ARI病例的主要病原体之一,主要影响18岁以下人群,具有明显季节性分布特征,以HAdV-B3型为主要流行株型。

     

    Abstract:
    Objective To understand the infection status and genetic characteristics of human adenovirus (HAdV) in acute respiratory infection (ARI) cases in Changshu, Jiangsu Province, China, from January to December 2024.
    Methods A total of 1 718 throat swabs were collected from outpatients and hospitalized ARI patients in Changshu from January to December 2024. Seventeen common respiratory pathogens were detected by using real-time quantitative polymerase chain reaction (RT-qPCR). For HAdV-positive samples, conventional PCR was performed to amplify the hypervariable Loop2 region of the hexon gene for preliminary genotyping. Subsequently, the penton base gene and fiber gene were further amplified to characterize the genotypes and sequence features of HAdV.
    Results A total of 660 positive pathogen cases were detected in 1 718 ARI cases (38.42%), in which, 119 were positive for HAdV, accounting for 6.93% (119/1718) of all ARI cases and 18.03% (119/660) in all pathogen-positive cases. There were 71 cases of HAdV infection (59.66%) and 48 cases of mixed infection of HAdV and other pathogens (40.34%). The differences in HAdV detection rate among different age groups were significant (χ2= 25.029, P < 0.001), with the highest rate in age group 5-18 years (11.73%). The incidence of HAdV infection increased markedly from August to September, with a peak in September (22.50%). A total of 49 HAdV gene sequences were obtained, in which HAdV-B3 was the predominant genotype.
    Conclusion HAdV was one of the major pathogens causing ARI in Changshu in 2024, mainly affecting individuals under 18 years old. The infection had obvious seasonal distribution, and HAdV-B3 was the predominant genotype.

     

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