2010-2023年中国H5亚型高致病性禽流感病毒2.3.4.4b分支特征分析

Characteristics of highly pathogenic avian influenza A (H5) viruses in clade 2.3.4.4b in China, 2010−2023

  • 摘要:
    目的 基于H5亚型高致病性禽流感病毒2.3.4.4b分支全球蔓延现状,分析2010—2023年中国H5亚型2.3.4.4b分支病毒传播流行和遗传进化特征。
    方法 收集整理2010—2023年全球流感共享数据库中H5亚型2.3.4.4b分支病毒表面蛋白血凝素(HA)基因序列,结合病毒的宿主来源、采样时间和地理分布等元数据信息,基于最大似然法构建系统发育树,利用谱系生物地理学推断病毒传播路径,分析中国H5亚型2.3.4.4b分支病毒的宿主来源、遗传进化特征和时空传播动态。
    结果 2010—2023年中国野生水禽、家禽中存在H5N1、H5N6和H5N8亚型的高致病性禽流感病毒共流行,不同亚型的宿主来源存在差异;H5N1和H5N8亚型主要为野生水禽来源,H5N6亚型主要为家禽来源。遗传进化分析显示,H5亚型2.3.4.4b分支根据进化时间形成明显的3个簇,即cluster Ⅰ、Ⅱ和Ⅲ,与全球3次疫情的流行趋势相一致。 谱系生物地理学推断分析显示,华中地区是中国H5亚型2.3.4.4b分支病毒进化和传播的驱动中心。
    结论 2010—2023年H5亚型2.3.4.4b分支病毒在中国持续流行,通过野鸟迁徙、禽类交易等有输入的高风险,中国应持续开展人群、家禽、野生水禽等全方位的流感监测预警。 本研究为中国H5亚型高致病性禽流感病毒的风险评估提供了依据。

     

    Abstract:
    Objective Based on the global spread of highly pathogenic avian influenza A (H5) viruses in clade 2.3.4.4b, this study analyzed the transmission and phylogenetic evolution characteristics of the clade 2.3.4.4b viruses in China.
    Methods The hemagglutinin (HA) gene sequences of H5 subtype clade 2.3.4.4b viruses were collected from Global Initiative of Sharing All Influenza Database. Combined with metadata such as host source, sampling time and geographical distribution of the viruses, a phylogenetic tree was constructed based on the maximum likelihood method, and the transmission path was inferred by phylogeography method to analyze the host source, temporal and spatial transmission and genetic evolution characteristics of H5 subtype clade 2.3.4.4b viruses in China from 2010 to 2023.
    Results H5N1, H5N6 and H5N8 subtypes avian influenza viruses spread in wild waterfowl and poultry in China with different host sources. H5N1 and H5N8 viruses were mainly from wild waterfowl, and H5N6 viruses were mainly from poultry. Phylogenetic analysis showed that clade 2.3.4.4b viruses formed three obvious clusters (I, Ⅱ, Ⅲ) according to the evolutionary time, which were consistent with the trends of three global epidemics. Phylogenetic geographic analysis showed that the transmission and evolution of H5 subtype clade 2.3.4.4b viruses originated from central China.
    Conclusion  Influenza A(H5) viruses in clade 2.3.4.4b continue to spread in China, and there is a high risk for virus importation through wild bird migration and poultry trade. All-round avian influenza surveillance and early warning in people, poultry and wild waterfowl should be continued. This study provided evidence for the risk assessment of H5 subtype avian influenza virus in China.

     

/

返回文章
返回