六种食源性病原微生物多重定量聚合酶链式反应检测方法的建立

Establishment and application of a multiplex quantitative polymerase chain reaction assay for detections of six foodborne pathogens

  • 摘要:
    目的 建立一种检测6种常见食源性病原微生物的多重定量聚合酶链式反应(qPCR)方法。
    方法 设计针对6种常见食源性病原体(单核增生李斯特菌、沙门菌、副溶血性弧菌、诺如病毒、大肠埃希菌O157:H7、金黄色葡萄球菌)的特异性引物及多重qPCR探针,优化引物、探针序列及反应体系以建立多重qPCR方法。 对该方法进行标准曲线和检测限分析、特异性与抗干扰试验,并检测模拟样品以评价其适用性。
    结果 本研究建立了六重两体系的qPCR检测方法,每个体系可检测3种病原体,两个体系中的最低检测限均为10 拷贝/µL,相关系数R2均大于0.99,P值均小于0.001。 6种目标病原体均出现对应扩增曲线,而非目标病原体均未出现,能够实现特异性检测。 同时,当检测体系中出现两种及以上不同浓度的目标病原体时,相互之间无干扰和抑制现象。 模拟样品检测显示,该多重qPCR能够特异性对6种目标病原体进行检测。
    结论 本研究建立了一种灵敏度高、特异性强的多重qPCR方法,可用于快速检测6种常见的食源性病原体。

     

    Abstract:
    Objective To establish a multiplex quantitative polymerase chain reaction(qPCR)assay for the detections of six common foodborne pathogens.
    Methods Specific primers and multiplex qPCR probes were designed to target six common foodborne pathogens: Listeria monocytogenes, Salmonella, Vibrio parahaemolyticus, Norovirus, Escherichia coli O157:H7, and Staphylococcus aureus. The primers, probes, and reaction conditions were optimized for the establishment of the multiplex qPCR assay. The assay was evaluated through standard curve construction, limit of detection (LOD) analysis, specificity test, interference test and simulation sample testing to assess its applicability.
    Results A multiplex quantitative PCR assay targeting six pathogens was established based on two reaction systems. Each system detects three pathogens, with LOD of 10 copies/µL for both systems. The correlation coefficient (R2) for both systems was greater than 0.99, and the P-value was less than 0.001. Amplification curves were observed for the six target pathogens, while no amplification was seen for non-target pathogens, indicating high specificity of the assay. Additionally, no interference or inhibition was observed when multiple pathogens at different concentrations were tested simultaneously. Testing with simulated samples showed that the multiplex qPCR assay could specifically detect all the six target pathogens.
    Conclusion This study established a sensitive and specific multiplex qPCR assay, which can be used for the rapid detection of six common foodborne pathogens.

     

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