张眉眉, 于伟, 孙海波, 王璐璐, 姚文清. 辽宁省首株人腺病毒14型的分离与鉴定[J]. 疾病监测, 2014, 29(9): 684-687. DOI: 10.3784/j.issn.1003-9961.2014.09.004
引用本文: 张眉眉, 于伟, 孙海波, 王璐璐, 姚文清. 辽宁省首株人腺病毒14型的分离与鉴定[J]. 疾病监测, 2014, 29(9): 684-687. DOI: 10.3784/j.issn.1003-9961.2014.09.004
ZHANG Mei-mei, YU Wei, SUN Hai-bo, WANG Lu-lu, YAO Wen-qing. First isolation and identification of human adenovirus type 14 in Liaoning[J]. Disease Surveillance, 2014, 29(9): 684-687. DOI: 10.3784/j.issn.1003-9961.2014.09.004
Citation: ZHANG Mei-mei, YU Wei, SUN Hai-bo, WANG Lu-lu, YAO Wen-qing. First isolation and identification of human adenovirus type 14 in Liaoning[J]. Disease Surveillance, 2014, 29(9): 684-687. DOI: 10.3784/j.issn.1003-9961.2014.09.004

辽宁省首株人腺病毒14型的分离与鉴定

First isolation and identification of human adenovirus type 14 in Liaoning

  • 摘要: 目的 研究从急性呼吸道感染(acute respiratory disease,ARD)患者咽拭样本中分离到的1株人腺病毒的基因型别。 方法 从辽宁省沈阳市采集ARD患者咽拭样本,用细胞培养方法分离病毒,对引起HEP-2细胞病变(CPE)的病毒用人腺病毒属通用引物进行聚合酶链反应(polymerase chain reaction,PCR)检测,并对阳性PCR产物进行测序分析;对病毒六邻体基因(HEXON)进行测序并与GenBank中其他人腺病毒参考毒株序列进行比较;用Mega 3.1软件、以邻位相连法构建人腺病毒属HEXON基因遗传进化树。 结果 从辽宁省沈阳市ARD患者咽拭样本中分离到1株病毒,人腺病毒属通用引物PCR检测阳性,阳性PCR产物测序结果与人腺病毒14型参考毒株序列完全一致;该腺病毒HEXON基因测序全长2838 bp,负责编码946个氨基酸,亦与人腺病毒14型参考毒株序列有100%的一致性;HEXON基因遗传进化树分析显示该腺病毒与人腺病毒14型参考毒株在系统发生树上处在同一进化分支上。 结论 辽宁省沈阳市ARD患者咽拭中分离到的腺病毒为人腺病毒14型,GenBank收录号为KC825052。

     

    Abstract: Objective To understand the genotype of 1 human adenovirus strain isolated from throat swab of a patient with acute respiratory disease. Methods The throat swabs were collected from ARD patients in Shenyang, Liaoning province and viruses were isolated by cell culture. The isolated virus causing cytopathogenic effect (CPE) on HEP-2 cells was tested by using polymerase chain reaction (PCR) with universal human adenovirus primers and the positive. PCR-product were sequenced and analyzed. The complete genome of Hexon were sequenced and compared with sequences of the other human adenovirus from GenBank. The phylogenetic tree of the complete genome of Hexon gene was constructed by using neighbor-joining method with software Mega 3.1. Results One adenovirus strain was isolated form a patient with ADR and the PCR result was positive. The sequence of amplifying segment was the same as human adenovirus type 14 reference strain. The entire genome of hexon was 2838 nucleotides long and was predicted to encode 946 amino acids, which shared 100% homology with human adenovirus type 14 reference strain. Phylogenetic analysis of the complete genome of Hexon showed the isolate and human adenovirus type 14 reference strain all belonged to one branch in the phylogenetic tree. Conclusion The strain isolated from the throat swab of a ARD patient in Shenyang was human adenovirus type 14 (GenBank accession number: KC825052).

     

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